Journal:

Article Title: Development of Variable-Number Tandem Repeat Typing of Mycobacterium bovis : Comparison of Results with Those Obtained by Using Existing Exact Tandem Repeats and Spoligotyping

doi: 10.1128/JCM.40.6.2126-2133.2002

Figure Lengend Snippet: VNTR allelic profiles of the M. bovis field isolates and MTBC isolates a

Article Snippet: A further 13 clonally derived M. bovis BCG daughter strains that have been passaged in vitro hundreds of times since 1921 ( 2 ) were included (kindly supplied by M. A. Behr [Montreal General Hospital, Montreal, Canada]). table ft1 table-wrap mode="anchored" t5 TABLE 2. caption a7 Species Strain(s) Source(s) b VNTR allelic profile 0960 2531 3232 1451 1895 4156 3336 1281 M. bovis 030, 033 ROI 2 4 8 4 2 2 8 2 005, 036, 044, 045 NI, ROI 2 4 8 4 3 2 3 2 001, 002, 006, 007, 010*, 011*, 013, 014, 015, 016, 017, 025, 026, 029, 032, 034, 035, 037, 040, 041, 047 NI, ROI 2 4 8 4 4 2 3 2 038, 039, 042, 046 NI 2 4 9 4 2 2 4 2 031 ROI 2 4 9 4 4 2 10 2 004, 009, 019, 020, 021 ♣ , 022 ♣ , 023 ♣ , 024, 027, 043 NI 2 4 10 4 4 2 3 2 003, 008 NI 2 4 11 3 4 2 4 2 012 NI 2 4 11 4 4 2 6 2 008 NI 2 4 11 4 4 2 8 2 028 ROI 2 5 12 3 4 2 4 2 AF2122/97 VLA 2 4 9 4 4 2 3 2 19210 ATCC 2 4 12 4 4 2 10 2 M. bovis BCG 5692 NCTC 2 4 7 4 4 2 12 2 P3 RIVM 2 4 6 4 4 1 11 2 M. tuberculosis H37Rv NCTC 3 6 4 4 4 3 8 2 14323 RIVM 5 3 22 2 2 4 9 2 CDC1551 CSU 5 5 7 4 2 4 9 2 M. africanum 25420 ATCC 7 4 8 4 4 4 10 2 M. microti 8710 NCTC 5 4 13 4 4 4 21 2 Open in a separate window a Isolates that are epidemiologically linked are labeled with like symbols. b Abbreviations: NI, Northern Ireland; ROI, Republic of Ireland; ATCC, American Type Culture Collection; NCTC, National Collection of Type Cultures; VLA, Veterinary Laboratories Agency, Weybridge, United Kingdom; RIVM, National Institute of Public Health and the Environment, Bilthoven, The Netherlands; CSU, Colorado State University.

Techniques:

Journal:

Article Title: Development of Variable-Number Tandem Repeat Typing of Mycobacterium bovis : Comparison of Results with Those Obtained by Using Existing Exact Tandem Repeats and Spoligotyping

doi: 10.1128/JCM.40.6.2126-2133.2002

Figure Lengend Snippet: PCR primer sequence, repeat unit size, and locus position on the M. tuberculosis H37Rv genome and the allelic variants of the orthologous VNTRs in M. tuberculosis CDC1551 and M. bovis AF2122/97 genomes

Article Snippet: A further 13 clonally derived M. bovis BCG daughter strains that have been passaged in vitro hundreds of times since 1921 ( 2 ) were included (kindly supplied by M. A. Behr [Montreal General Hospital, Montreal, Canada]). table ft1 table-wrap mode="anchored" t5 TABLE 2. caption a7 Species Strain(s) Source(s) b VNTR allelic profile 0960 2531 3232 1451 1895 4156 3336 1281 M. bovis 030, 033 ROI 2 4 8 4 2 2 8 2 005, 036, 044, 045 NI, ROI 2 4 8 4 3 2 3 2 001, 002, 006, 007, 010*, 011*, 013, 014, 015, 016, 017, 025, 026, 029, 032, 034, 035, 037, 040, 041, 047 NI, ROI 2 4 8 4 4 2 3 2 038, 039, 042, 046 NI 2 4 9 4 2 2 4 2 031 ROI 2 4 9 4 4 2 10 2 004, 009, 019, 020, 021 ♣ , 022 ♣ , 023 ♣ , 024, 027, 043 NI 2 4 10 4 4 2 3 2 003, 008 NI 2 4 11 3 4 2 4 2 012 NI 2 4 11 4 4 2 6 2 008 NI 2 4 11 4 4 2 8 2 028 ROI 2 5 12 3 4 2 4 2 AF2122/97 VLA 2 4 9 4 4 2 3 2 19210 ATCC 2 4 12 4 4 2 10 2 M. bovis BCG 5692 NCTC 2 4 7 4 4 2 12 2 P3 RIVM 2 4 6 4 4 1 11 2 M. tuberculosis H37Rv NCTC 3 6 4 4 4 3 8 2 14323 RIVM 5 3 22 2 2 4 9 2 CDC1551 CSU 5 5 7 4 2 4 9 2 M. africanum 25420 ATCC 7 4 8 4 4 4 10 2 M. microti 8710 NCTC 5 4 13 4 4 4 21 2 Open in a separate window a Isolates that are epidemiologically linked are labeled with like symbols. b Abbreviations: NI, Northern Ireland; ROI, Republic of Ireland; ATCC, American Type Culture Collection; NCTC, National Collection of Type Cultures; VLA, Veterinary Laboratories Agency, Weybridge, United Kingdom; RIVM, National Institute of Public Health and the Environment, Bilthoven, The Netherlands; CSU, Colorado State University.

Techniques: Sequencing